Enquanto Naruto e Sakura demonstram suas novas habilidades, Deidara ataca a Aldeia da Areia e é confrontado por Gaara.

Granny Chiyo and Sakura manage to expose Sasori, who amazingly looks no older than he did twenty years earlier.

Kabuto creates a fake corpse that resembles Sai, containing hidden traps to slow down Yamato's clone after sensing it. Naruto hasn't completely recovered from using the Demon Fox's chakra, and Yamato says that he will be left behind if he cannot keep up. Naruto is determined to finish his mission and not slow the team down. However Team Kakashi is forced to take a break when it's clear that Sakura has not fully recovered from her own injuries. Yamato then uses this opportunity to talk to Naruto alone and reveals to him that the one who hurt Sakura was Naruto himself. Naruto is shocked by what Yamato says to him.

Orochimaru and Kabuto convince Sasuke to withdraw with them, and Naruto weeps over his failure to return Sasuke to the village, but Sakura reassures him that they will bring Sasuke back together. Naruto's team reports to Tsunade about the results of the mission, and Tsunade is greatly angered over Danzo's scheme, particularly his leaking classified information to further it. Sai asks Danzo to allow him to remain with Team Kakashi, and Danzo reluctantly agrees. Sai goes on a mission with his team, having come to see them as his friends.

Tsunade suspects that Danzou is plotting something and orders an investigation of him. Team Kakashi, Chiriku and Sora notice the coffins moving on their own, but fail to intercept them. The coffins emerge on a cliff, where the leader of the enemy ninja orders his subordinates to deal with their foes. The ninjas turn the area into a maze of rocky canyons and pits, full of deadly traps. The team members are separated from each other, and begin facing off against the enemy. Yamato speculates that the ninja may have orchestrated the theft in order to target someone on his team.

Hidan e Kakuzu vão para o Templo de Fogo para iniciar a próxima missão. Naruto recomeça seu treinamento e avança para a próxima fase.

Shikamaru e seus companheiros tentam desesperadamente conter a ofensiva do Estilo Fogo de Kakuzu. Enquanto isso, Kakashi tenta entender como que seu oponente pode ter tantas Naturezas de Chakra.

Obito ignores Kakashi’s order to continue with the mission and leaves to save Rin, who was kidnapped by the Rock ninja. But the enemies detect Obito’s arrival and defeat him. Kakashi arrives at the last minute and saves Obito…

Jiraiya realizes that the six Pains are all ninja he's met before. Putting various pieces of information together, Jiraiya figures out Pain's true identity, but Pain doesn't intend to allow Jiraiya to leave with that information alive. Elsewhere, the fated meeting between Itachi and Sasuke arrives, and Sasuke foresees Itachi's death.

After the peformance of the forbidden jutsu, Hotaru is horrified to see the damage the jutsu has done. Shiranami then notices the forbidden jutsu overflowing with chakra and the fact that it would destroy itself along with Hotaru. While Naruto chases the fleeing Shiranami, Utakata tries to save Hotaru using the hidden power within him. Can Utakata save Hotaru?

While she and Neji prepare to visit an old man who makes ninja weapons, Tenten remembers the first time she visited him alongside Naruto and Neji. Utilizing a strange new weapon she had never seen before, Tenten fought against two ninja who had stolen two of the man's powerful weapons.

Inside his mind, Naruto continues his battle against Nine Tails to take control of its immense power.

Zetsu reports on new intel from Kisame and Madara learns about Naruto hideout. Tsunade, Gaara, Lord Raikage, and others must figure out how to get Naruto out of the secret island of Land of Lighting and all without telling him about the war. New mission is introduced.

Naruto and Killer Bee rush to the battlefield when Nine Tails suddenly speaks to Naruto inside his mind. The Nine Tails questions Naruto’s intent to end the hatred in the world and reminds him of how he was unable to save Sasuke.

A group of Allied Shinobi, including Omoi and Maki of the Sand, battle against several reanimated enemies. Maki recognizes one of them as Pakura, her former master who was a Sand Village hero.

Gaara and Ohnoki manage to overcome the Second Mizukage’s mirage attack. Having taken an interest in Gaara, the Second Mizukage decides to further test the young Kage’s skills.

During their battle against the White Zetsu, Shino’s beetles detect the presence of another enemy. Leaving the fight to Kiba and the others, Shino goes to investigate and finds Torune preparing to unleash his forbidden jutsu.

Naruto and Killer Bee face off against the masked man originally thought to be Madara Uchiha, in addition to the reanimated Jinchuriki. Naruto is shocked when he recognizes one of the Jinchuriki.

With Izanami activated, and Kabuto trapped within its infinite loop, Sasuke uses this time to question his brother about the technique. Itachi tells Sasuke about the history behind Izanami's creation as well as the Uchiha clan's use of the technique.

After being saved by the target he was ordered to kill, Tenzo realizes that the man known as “Kakashi the Friend Killer” is someone who values the lives of his comrades more than anyone.

Obito has gained complete control over his power as the Ten Tails Jinchuriki. His powerful, cold-blooded attacks force Naruto and his friends into a corner.

Naruto's past, thoughts, and feelings flow into the consciousness of every shinobi, unifying their hearts.

Despite all efforts, Kurama is extracted from Naruto, and ultimately, all the Tailed Beasts are imprisoned inside the Gedo Statue.

Kiba and his team are in pursuit of Hidden Grass Ninja who have stolen their scroll!

Obito doesn’t understand Kakashi's way of thinking, but he finally learns why Kakashi put his mission first that time at Kannabi Bridge. Presently, Obito and Kakashi return together to confront Madara.

Team Jiraiya, Shikamaru, and his Leaf teammates are lured into a mysterious village during their battle. A couple children from the village get caught in the crossfire and fall into a cave-in. Yahiko’s team rushes to the rescue, but Shikamaru doesn’t budge. Meanwhile, Naruto and Neji’s teams rendezvous, but a mysterious voice addresses them out of nowhere!

Sasuke leaves the village in order to obtain power from Orochimaru. Naruto and his friends learn that Sasuke is in danger and decide to go after him. To keep this a secret, only Naruto and Shikamaru set out on this mission, but on the way the duo are accosted by masked ANBU shinobi!

Hagoromo's two sons, Ashura and Indra, share a happy childhood, training and playing together. Indra is naturally gifted with great talent, and at a tender age is nicknamed the “genius of Ninshu.” On the other hand, Ashura has no aptitude for Ninshu. Still, the two boys are very close. But Hagoromo is unaware of the malevolent power stirring in the shadows…