The story begins with footage of the 30 year war, and all the hardships mankind has had with the alien prescense known as "the Jam." We are now shown a group of jets engaging the Jam in a ariel battle. Enter Rei Fukai, a young pilot who gets the honor of flying Yukikaze. On their way back to base, Rei and his co-pilot encounter another jet fighter, it appears to be one of their own, but Yukikaze gives the order that it’s an enemy. Rei shoots it down. Upon his arrival, he is scolded by his superior, and friend, James. He is brought before the commanding officiers and he explains to them how Yukikaze recvealed it to be a Jam. On their way home, James tries to comfort Rei. The next day James takes Rei out for a little relaxation. He tells him stories about how far along Rei has come. Rei seems to be a little cheered up now. The next morning James discusses Yukikaze with his general, Lynn. Later that day Rei and his co-pilot are sent off on a mission…