This is the story of Tooru Kokonoe who has enrolled at Kouryou Academy, a school which trains students in wielding Blaze, soul powered weapons to prepare them for the Dorn Agency's special peacekeeping corps. When Tooru is partnered with a mysterious girl: Julie Sigtuna, he finds he has to overcome many hurdles to ensure their teamwork and fighting skills are up to par for the duration of their training.

The two main characters, Katsumi and Isami Minato, are brothers who live with their younger sister and father who runs a specialty store. One day, they found the R/B Gyro and R/B Crystals, which transforms Katsumi into Ultraman Rosso and Isami into Ultraman Blu.