Stardate: 54014.4 - Partially transformed into Borg drones, Janeway, Tuvok, and Torres run a covert operation on board a Borg ship to infect the collective with a virus that will free subdued individuals from the hive's control.

Stardate: 54129.4 - A key Borg component in Seven's brain begins shutting down, leading to the possibility that she may be facing the equivalent of a terminal illness.

Stardate: 54090.4 - An investigation of mysterious attacks on members of the crew uncovers a buried plot involving Tuvok and a Maquis fanatic.

Stardate: Unknown - The Doctor is abducted from Voyager and forced to work in a hospital where patients are treated based on their social status.

Stardate: 54208.3 - The Voyager crew receives a transmission from the Alpha Quadrant that contains an interactive holographic program of Lieutenant Barclay, who informs them that Starfleet has found Voyager a way home.

Stardate: 54283.3 - In a region of space where holograms are prohibited, the Doctor is forced to hide by transferring his program into Seven's mind, upon which he takes over control of her body.

Stardate: 54274.7 - Ensign Kim finds himself making the hard choices of mission commander when he agrees to help the crew of a ship in need.

Stardate: 54337.5 - Voyager answers a distress call from a Hirogen outpost – only to find carnage caused by holographic technology that Captain Janeway has given them.

Stardate: 54337.5 - Voyager secretly trails two Hirogen ships in pursuit of the renegade hologram ship. Iden, the band's self-appointed leader, begins showing signs of delusional behaviour when he considers himself as the 'saviour of his people', and believes that his people will worship him as a God in their new settlement. With Voyager and the Hirogen ships trailing close behind, the Doctor and Torres must find a way to disable the ships and the holograms before they come under attack from the Hirogen, and before Iden can execute his plan.

Stardate: Unknown - A spatial anomaly divides Voyager into various time frames of the past and future, leaving Chakotay as the only person who may be able to put the pieces back together.

Stardate: 54452.6 - When B'Elanna learns she is pregnant, she tries to proactively repress her child's Klingon heritage on the basis of her own troubled past.

Stardate: 54474.6 - When Voyager provides emergency transportation for alien prisoners sentenced to die, a medical procedure unexpectedly and radically changes the values and temperament of one of the prisoners.

Stardate: 54518.2 - The captain of a Klingon ship on a generational holy mission believes Torres' unborn child may lead them to a new era of enlightenment.

Stardate: 54553.4 - Voyager is pulled into a barren spatial void where survival is based on preying upon others.

Stardate: 54584.3 - The Voyager crew is abducted to an alien world, where their memories are altered and they are dropped into the large population of an industrial labor force.

Stardate: 54622.4 - It's up to Chakotay, Kim, and the Doctor to liberate the Voyager crew and help uncover a conspiracy of illegal labor practices.

Stardate: Unknown - Seven of Nine runs a series of holodeck simulations to explore her untapped emotions.

Stardate: 54704.5 - Q comes to Voyager and asks Janeway to help him teach lessons of responsibility to his troublesome son.

Stardate: 54732.3 - When the Doctor arranges to have his recently completed holodeck novel published in the Alpha Quadrant, certain aspects of the story hit too close to home among his shipmates.

Stardate: 54775.4 - The Voyager crew, on a mission to track down a historic Earth probe designed to contact intelligent life, finds the probe had indeed crossed paths with another civilization, but with catastrophic results.

Stardate: 54817.5 - Chakotay and Seven find themselves trapped with a primitive culture that is separated from the rest of its world by an energy field designed to protect them.

Stardate: 54868.6 - Neelix finds he must make hard choices when he becomes involved in the struggle of Talaxian refugees whose home in an asteroid belt is threatened by alien miners.

Stardate: 54890.7 - The Doctor is forced to carry out a secret mission where he must impersonate members of the Voyager crew.

Stardate: 54973.4 - Twenty-six years in the future, a regretful Admiral Janeway hatches an audacious plan to bring Voyager home sooner, rather than have it spend an additional sixteen years making its journey.